MODSIM 2013 starts tomorrow

The 20th International Congress on Modelling and Simulation (MODSIM2013), in conjunction with the 22nd National Conference of the Australian Operations Research Society (ASOR2013), begins tomorrow in Adelaide, South Australia.

The final programme of talks and list of abstracts are online.

Conference venue (click for photo credit)

Blogroll: AntarcticArctic

AntarcticArctic is a blog by a “Waste Management Specialist” at the Amundsen–Scott South Pole Station over the dark Antarctic winter. It has covered several interesting topics, such as the Aurora Australis and Aurora Borealis (see satellite image below).

I’m not sure if the blog will survive its author’s return to warmer climes – but, through both words and photographs, it has succeeded in sharing a perspective on our planet that most of us will never experience.

A wooden water filter

A recent paper on (also reported on the MIT technology review) suggests an interesting approach to water filtering.

The water filter suggested by Lee, Boutilier, Chambers, Venkatesh, and Karnik

The vessels of plant xylem consist of tubular cells which undergo programmed cell death, leaving long thin tubes which conduct water to the top of even the tallest tree, through capillary action. As illustrated below, the individual xylem vessel elements include perforation plates at their ends; it is these which can act as water filters.

Lee, Boutilier, Chambers, Venkatesh, and Karnik found that the water filter illustrated above could remove particles larger than 0.1 µm – enough to filter out bacteria, though not viruses. Epoxy glue is needed to seal the filtering wood into tubing, however, and the flow rate is a low 180 ml per hour, even under pressure. Still, this is a very interesting low-cost water-purification technique.

Xylem cells (image by Kelvinsong)

Australian plant families

This visualisation (made using R) shows the sizes of major Australian plant families, compared to world totals (based on slightly old data from here).

Australia’s 836 orchid species are only 3% of the world total, for example, but Australia has 89% of the Goodeniaceae. Plants illustrated in the chart include the Golden Wattle and Sturt’s Desert Pea.

Palettes from paintings

I have been experimenting recently with R, my favourite statistical toolkit. The plot above (of the gender balance in Australian states and territories) uses a palette extracted from Vermeer’s famous Girl with a Pearl Earring (below) – a brown-and-blue diverging scale with some pink highlights. Interestingly, this is a palette which still works well under simulated colour-blindness. It looks good too.

Oh, and those numbers on the map? Partly related to an excess of males in the mining industry, and partly to an excess of females among retired people.

Progress on prime pairs

One of the more famous unsolved questions of mathematics is the twin prime conjecture. There are many “twin prime” pairs of the form (p, p+2), where both p and p+2 are prime numbers. The pair (3, 5), for example. Or (5,7), (11,13), (17,19), (29,31), (10007,10009), or (10000139,10000141). The question is whether there are infinitely many such pairs.

A recent burst of work has seen progress towards answering this question, and a paper on by James Maynard (Centre de recherches mathématiques, Université de Montréal) reports that there are infinitely many pairs of primes separated by at most 600. See also the story in Wired. The underlying unsolved question might be cracked soon!

Three lenses on data visualisation

Data visualisation is one of my favourite topics. We can examine data visualisation in terms of three “lenses.” The first lens is that of mathematical mapping. Typically we have a visual element that represents one or more real-world variables, and we want a clear mapping from one to the other – that is, a one-to-one mapping without too much distortion.

For example, Fisher’s Iris flower data set gives 4 measurements for each of 150 flowers of three species of Iris. Multidimensional scaling can be used to map distances in the 4-dimensional data to distances in a 2-dimensional image (below). Flowers with similar measurements map to dots close together in the image, and flowers with wildly different measurements map to dots far apart. Some distortion is inevitable here, but the diagram clearly shows that Iris setosa flowers (se) are quite different from Iris virginica (vi) and Iris versicolor (ve), which sometimes have similar measurements:

In many visualisations, the mathematical mapping is defined by a colour scale, as in this map of fine particulate air pollution (credit: Aaron van Donkelaar, Dalhousie University):

The second lens is that of cognitive psychology. We build visualisations for people, not Martians, and people see some things more easily than others. A great deal has been written on this topic. To pick just one example, rainbow scales like the one above have been strongly criticised. They fail when turned into grey-scale, they may over-emphasize the transition at whichever value is coded yellow, and they can also confuse people with colour-blindness. It must be said, however, that the rainbow scale above (an improved version) combines hue and brightness in a way that actually makes good sense to people with most forms of colour-blindness (see the simulation below of what a person with red/green colour-blindness would see). Consequently, the rainbow scale above probably works better for this dataset than many of the alternative colour scales would. On the other hand, the nonlinearity in the colour scale is rather confusing.

The final lens is that of design. Visualisations that are mathematically and cognitively satisfactory may still be boring or ugly. Although the design lens is a little more subjective, there are many examples of good visualisation design out there. The tide prediction infographic by Kelvin Tow below (submitted to the 2013 Information is Beautiful Awards) is just one. The classic books by Edward Tufte also have a lot of good advice in this area.